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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946595.1_cds_XP_016488635.1_79252
CDS Infomation

[gene=LOC107808626] [db_xref=GeneID:107808626] [protein=protein CLT2, chloroplastic-like] [protein_id=XP_016488635.1] [location=complement(join(26454..26608,26725..26850,27884..28007,28747..28797,28944..28979,29063..29162,29417..29532,31597..31634,31924..32069,33922..34316))] [gbkey=CDS]
Sequence

ATGGAGTCTCACTCTCTAACCATTCGCGCCAAATTCCCAAACCATTTCCACATTTCATCA
TCTCTTCCTCGTCTGGCCATTATCAATATACCAAACCCTAAATTTCTCTTCATATTACCT
TCTTCTCCGATGCCTCTTCTTACATCTTCACGACGACTTGAAATCCACCGCAGGAGGACC
TCTTTTTCACGGCAGTCTTCGAATTCGAGCTCAAAGTTTATCGCACGCGCCGTGGGAAGT
GATTCTGACCGCCAATCAAATGTGTCTAGAGAGCTAATCATTTTGAACTCTGCTTTAACT
CTGGTGCTTGGGGTTGCGAATCGTGTACTTTACAAACTTGCCCTTGTTCCTATGAAGGAA
TACCCGTTTTTTCTAGCTCAGGTTACCACTTTTGGGTACTTGACTATTTACTTATCCATA
TTGTATGCGAGATATCGTGCTGGTATTGTAACTAACGAGATGGTGGCCTATCCAAAATCA
CGCTTTTTGCTCATTGGTTTCCTTGAAGCCCTGGGGGTTATTTCTGGAATGTATGCTGGA
GCAATGCTTCCTGGACCAGCCATACCGATACTTAACCAGACCTTCTTGGTGTGGCAGTTG
GCTCTCTCTGTTTTCATACTTGGGCGAAGATACTCGATGAATCAGATAGGCGGATGCTTA
CTGGTGGCTGCTGGAGTGGTACTAGCCGTAACAAGTGGACCAGACTCCAATCAGATGCTG
GCAGGAATCGCATTTGTTTGGCCAGTATTGATGGTTGCTTCGAGTGCATTCCAAGCCGCT
GCGTCTGTTATTAAGGAGTTCGTTTTTATTGATGCTGCCAGCAGACTCAAGGGGAAGGTT
CTTGATATTTTTGTCGTCAATTCTTTTGGATCTGCATTCCAGGCTCTTTTTGTTCTCCTT
TTTCTGCCTTTTCTTTCAAACTTGAAGGGGATACCATTTTCTGAGCTCCCTTCATTTCTT
AAGAGCGGTGCTGGTTGCTTCTTCAACATAGGGAACAATATTTCAGGTTGTGATGGGGCG
CCGTTGCTACCCCTTCTTTACATATTTACAAATATTGCTTTCAACATATCAATTCTCAAT
CTTGTGAAAATCTCGACTGCTGTGATTTCATCCCTTGTTGTGATGTCATCAGTGCCTTTA
TCAATGTATCTTCTCTCCGTACCGCTGCCATATCTCCCAGAAGGTTCAGTTTTGAGCCCC
TATTTCCTTCTCGGCAGTGCTGTCCTTCTCATTGGTCTTATCATGTATAACATACCACGG
GCTCAGAAGCAGGACAAAGAATTGTGA

Peptide Sequence

PEP ID

XP_016488635.1
PEP Infomation

PREDICTED: protein CLT2, chloroplastic-like [Nicotiana tabacum]
Sequence

MESHSLTIRAKFPNHFHISSSLPRLAIINIPNPKFLFILPSSPMPLLTSSRRLEIHRRRT
SFSRQSSNSSSKFIARAVGSDSDRQSNVSRELIILNSALTLVLGVANRVLYKLALVPMKE
YPFFLAQVTTFGYLTIYLSILYARYRAGIVTNEMVAYPKSRFLLIGFLEALGVISGMYAG
AMLPGPAIPILNQTFLVWQLALSVFILGRRYSMNQIGGCLLVAAGVVLAVTSGPDSNQML
AGIAFVWPVLMVASSAFQAAASVIKEFVFIDAASRLKGKVLDIFVVNSFGSAFQALFVLL
FLPFLSNLKGIPFSELPSFLKSGAGCFFNIGNNISGCDGAPLLPLLYIFTNIAFNISILN
LVKISTAVISSLVVMSSVPLSMYLLSVPLPYLPEGSVLSPYFLLGSAVLLIGLIMYNIPR
AQKQDKEL

Transcript Sequence

Gene sequence data has not been registered.